Important Information

KEGG web services

LMME does not contain/distribute information from the KEGG website, but contains functionality for the online-access to KEGG web services. As an end-user, you need to be aware of the KEGG license before using LMME.

Additional Libraries

LMME makes use of the following libraries, that are either included in or also used by Vanted:

For the subgraph color mapping, we used the i want hue color generator for disctinct colors.

Code Availability & License

LMME is available as open source software from our GitHub repository. Feel free to fork it or contribute and make a pull request.

LMME is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General Public License for more details.

Usage

If you plan to use the LMME source code, you are responsible for also checking the respective licenses and permissions of the used libraries/services for compliance.

Citation

If you use LMME in or for a scientific publication, please cite our latest publication:

Michael Aichem, Tobias Czauderna, Yan Zhu, Jinxin Zhao, Matthias Klapperstück, Karsten Klein, Jian Li, Falk Schreiber. Visual Exploration of Large Metabolic Models. Bioinformatics, Volume 37, Issue 23, 4460–4468, 2021.

Copyright

© Chair for Life Science Informatics, University of Konstanz 2020

Disclaimer

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